kaori
A C++ library for barcode extraction and matching
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kaori::SegmentedMismatches< num_segments > Member List

This is the complete list of members for kaori::SegmentedMismatches< num_segments >, including all inherited members.

add(const char *barcode_seq)kaori::MismatchTrieinline
get_length() constkaori::MismatchTrieinline
MismatchTrie()kaori::MismatchTrieinline
MismatchTrie(size_t barcode_length, DuplicateAction duplicates)kaori::MismatchTrieinline
optimize()kaori::MismatchTrieinline
search(const char *search_seq, const std::array< int, num_segments > &max_mismatches) constkaori::SegmentedMismatches< num_segments >inline
SegmentedMismatches()kaori::SegmentedMismatches< num_segments >inline
SegmentedMismatches(std::array< int, num_segments > segments, DuplicateAction duplicates)kaori::SegmentedMismatches< num_segments >inline
size() constkaori::MismatchTrieinline
STATUS_AMBIGUOUSkaori::MismatchTriestatic
STATUS_MISSINGkaori::MismatchTriestatic