kaori::SimpleBarcodeSearch::State Struct Reference

State of the search. More...

#include <BarcodeSearch.hpp>

Public Attributes
BarcodeIndex	index = 0
int	mismatches = 0

Detailed Description

State of the search.

This contains both the results of search() for a given input sequence, as well as cached mismatches to optimize searches for future inputs.

Member Data Documentation

index

BarcodeIndex kaori::SimpleBarcodeSearch::State::index = 0

Index of the known barcode that matches best to the input sequence in search() (i.e., fewest total mismatches). If all barcodes have more mismatches than allowed_mismatches, STATUS_UNMATCHED is returned. If multiple barcodes share the same lowest number of mismatches (not greater than allowed_mismatches), STATUS_AMBIGUOUS is returned.

mismatches

int kaori::SimpleBarcodeSearch::State::mismatches = 0

Number of mismatches with the matching known sequence. This should be ignored if index == STATUS_UNMATCHED, as the search will terminate early without computing the exact number of mismatches if allowed_mismatches is exceeded.

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The documentation for this struct was generated from the following file:

• kaori/BarcodeSearch.hpp