Here are the classes, structs, unions and interfaces with brief descriptions:

[detail level 123]

▼Nkaori	Namespace for the kaori barcode-matching library
CAnyMismatches	Search for barcodes with mismatches anywhere
CBarcodePool	Pool of barcode sequences for a variable region
CCombinatorialBarcodesPairedEnd	Handler for paired-end combinatorial barcodes
▼CCombinatorialBarcodesSingleEnd	Handler for single-end combinatorial barcodes
COptions	Optional parameters for `CombinatorialBarcodeSingleEnd`
▼CDualBarcodesPairedEnd	Handler for dual barcodes
COptions	Optional parameters for `DualBarcodesPairedEnd`
CDualBarcodesPairedEndWithDiagnostics	Handler for dual barcodes with extra diagnostics
▼CDualBarcodesSingleEnd	Handler for single-end dual barcodes
COptions	Optional parameters for `DualBarcodeSingleEnd`
CDualBarcodesSingleEndWithDiagnostics	Handler for dual barcodes with extra diagnostics
CFastqReader	Stream reads from a FASTQ file
▼CMismatchTrie	Base class for the mismatch search
CAddStatus	Status of the barcode sequence addition
▼CRandomBarcodeSingleEnd	Handler for single-end random barcodes
COptions	Optional parameters for `SingleBarcodeSingleEnd`
▼CScanTemplate	Scan a read sequence for the template sequence
CState	Details on the current match to the read sequence
▼CSegmentedBarcodeSearch	Search for known barcode sequences with segmented mismatches
COptions	Optional parameters for a `SegmentedBarcodeSearch`
CState	State of the search
▼CSegmentedMismatches	Search for barcodes with segmented mismatches
CResult	Result of the segmented search
▼CSimpleBarcodeSearch	Search for known barcode sequences
COptions	Optional parameters for `SimpleBarcodeSearch`
CState	State of the search
▼CSimpleSingleMatch	Search for a template with a single variable region
COptions	Optional parameters for `SimpleSingleMatch`
CState	State of the search on a read sequence
▼CSingleBarcodePairedEnd	Handler for paired-end single barcodes
COptions	Optional parameters for `SingleBarcodePairedEnd`
▼CSingleBarcodeSingleEnd	Handler for single-end single barcodes
COptions	Optional parameters for `SingleBarcodeSingleEnd`